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seung-lab

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  1. connected-components-3d connected-components-3d Public

    Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants; periodic boundaries (4, 8, & 6)

    C++ 344 42

  2. euclidean-distance-transform-3d euclidean-distance-transform-3d Public

    Euclidean distance & signed distance transform for multi-label 3D anisotropic images using marching parabolas.

    C++ 226 37

  3. kimimaro kimimaro Public

    Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)

    C++ 130 22

  4. cloud-volume cloud-volume Public

    Read and write Neuroglancer datasets programmatically.

    Python 127 42

  5. znn-release znn-release Public archive

    Multi-core CPU implementation of deep learning for 2D and 3D sliding window convolutional networks (ConvNets).

    C++ 94 33

  6. DracoPy DracoPy Public

    Python wrapper for Google's Draco mesh compression library.

    C++ 82 22

Repositories

Showing 10 of 177 repositories
  • neuroglancer Public Forked from google/neuroglancer

    WebGL-based viewer for volumetric data

    seung-lab/neuroglancer’s past year of commit activity
    TypeScript 22 Apache-2.0 296 91 35 Updated Jul 11, 2024
  • cloud-volume Public

    Read and write Neuroglancer datasets programmatically.

    seung-lab/cloud-volume’s past year of commit activity
    Python 127 BSD-3-Clause 42 76 2 Updated Jul 10, 2024
  • igneous Public

    Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.

    seung-lab/igneous’s past year of commit activity
    Python 41 GPL-3.0 16 18 3 Updated Jul 10, 2024
  • chunkflow Public

    Compose chunk operators to create a pipeline for local or distributed petabyte-scale computation

    seung-lab/chunkflow’s past year of commit activity
    Python 48 Apache-2.0 8 13 1 Updated Jul 10, 2024
  • cross-section Public

    Tools for computing properties of cross sections of 3D voxelized images.

    seung-lab/cross-section’s past year of commit activity
    C++ 3 LGPL-3.0 2 2 3 Updated Jul 10, 2024
  • dijkstra3d Public

    Dijkstra's Shortest Path for 6, 18, and 26-Connected 3D (Volumetric) Image Volumes

    seung-lab/dijkstra3d’s past year of commit activity
    C++ 68 GPL-3.0 13 7 1 Updated Jul 6, 2024
  • zfpc Public

    Exerimental container format for zfp encoded vector fields. zfpc = zfp container

    seung-lab/zfpc’s past year of commit activity
    Python 1 LGPL-2.1 0 0 0 Updated Jul 5, 2024
  • zfp Public Forked from LLNL/zfp

    Compressed numerical arrays that support high-speed random access

    seung-lab/zfp’s past year of commit activity
    C++ 0 BSD-3-Clause 155 0 0 Updated Jul 4, 2024
  • seuron Public Forked from wongwill86/air-tasks

    SEUnglab neuRON pipeline

    seung-lab/seuron’s past year of commit activity
    Python 5 MIT 6 1 0 Updated Jul 3, 2024
  • connected-components-3d Public

    Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants; periodic boundaries (4, 8, & 6)

    seung-lab/connected-components-3d’s past year of commit activity
    C++ 344 LGPL-3.0 42 8 4 Updated Jul 1, 2024
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