I'm not sure if there's an "overall listing" for the files, but you can try and run it differently for certain file/s
chkdsk [volume[[path]filename]]] [/F] [/V] [/R] [/X] [/I] [/C] [/L[:size]]
where as the path/filename is for FAT/FAT32 only and it specifies files to check for fragmentation. rest specs seen below:
/F Fixes errors on the disk.
/V On FAT/FAT32, this displays the full path and name of every file on the disk. On NTFS, this displays cleanup messages, if any.
/R Locates bad sectors and recovers readable information (implies /F).
/L:size NTFS only. Changes the log file size.
/X Forces the volume to dismount first if necessary (implies /F).
/I NTFS only. Performs a minimum check of index entries.
/C NTFS only. Skips checking of cycles within the folder structure.