My laptop has two drives inside: an SSD where I put the operative systems (WIndows 10 x64 and Linux in dual boot) and a hard disk which I use for media storage and installing most of softwares.
I did the Windows 10 reset and re-installation by choosing the options which let me deleting all personal data and files in the drive where Windows was installed (the SSD) without affecting the other drives.
Windows was reset and installed again on my pc and as soon as everything finished I launched some cleaning tools (which are portable and stored in the second hard disk, so I can use them without a new installation) and the reports say I have both many problems in the registry and some files to delete, as you can see in the screens below ->
I didn't delete them yet, so I can check for further information if needed for diagnosis.
My laptop didn't come with Windows 10 preinstalled and the first time I installed it I used a ISO from usb (I downloaded it from Microsoft website and I activated it with a license I bought on ebay); everything worked well, although I didn't run any diagnostic tool then and I cannot say if I had useless files and registry keys. This time Windows reinstalled itself automatically without asking me any license or ISO.
My question is:
Why a Windows 10 operative system which is supposed to be clean for having been reset and reinstalled on the same drive comes with errors in the registry and useless files and data? Might it cause any conflict while reinstalling my softwares on the "new" operative system?