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    Do you run some kind of disk-encryption?
    – akira
    Commented Oct 15, 2014 at 18:07
  • Actually, I think ubuntu server has a disk encryption on the Home directory as an option, I may have enabled that when I did the system install.
    – Brian Adam
    Commented Oct 15, 2014 at 18:56
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    Check this because your .ssh/* folder on that encrypted home-folder will be only visible once it is .. well .. decrypted :)
    – akira
    Commented Oct 15, 2014 at 18:57
  • Your right, that is the case. Any idea of how to work around this?
    – Brian Adam
    Commented Oct 15, 2014 at 19:05