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6 votes
1 answer
3k views

Non-parametric regression

I am conducting a mulitple first order regression analysis of genetic data. The vectors of y-values do not all follow a normal distribution, therefore I need to implement a non-parametric regression ...
Darren J. Fitzpatrick's user avatar
6 votes
2 answers
942 views

Subsets not significantly different but superset is

I have various clinical data on participants in a study. I'm looking at a continuous variable ("A") and a (binary) categorical variable (group) ("O"). I used a Wilcoxon test in R (the data are not ...
SabreWolfy's user avatar
  • 1,261
63 votes
7 answers
54k views

Which permutation test implementation in R to use instead of t-tests (paired and non-paired)?

I have data from an experiment that I analyzed using t-tests. The dependent variable is interval scaled and the data are either unpaired (i.e., 2 groups) or paired (i.e., within-subjects). E.g. (...
Henrik's user avatar
  • 14.3k
19 votes
2 answers
6k views

Nonparametric Bayesian analysis in R

I am looking for a good tutorial on clustering data in R using hierarchical dirichlet process (HDP) (one of the recent and popular nonparametric Bayesian methods). ...
suncoolsu's user avatar
  • 6,712
9 votes
1 answer
2k views

Alternative to the Wilcoxon test when the distribution isn't continuous?

One of the assumptions for using the Wilcoxon sign-rank test is that the underlying distribution is continuous (see here.) However, there are cases (for example, when analyzing Likert scale data) ...
Tal Galili's user avatar
  • 21.8k
7 votes
3 answers
1k views

How to do factorial analysis for a non-normal and heteroscedastic data?

I designed a field experiment with 4 independent factors but data is not normal and heteroscedastic. Friedman test (agricolae package) from R only fits for rbd. Can anybody suggest how to analyze my ...
kathy's user avatar
  • 131
6 votes
3 answers
2k views

What is a meaning of "p-value F" from Friedman test?

I'm a new R user and had just tried running friedman on non-normal and heteroscedastic data on seagrass. I am testing whether biomass is significantly different between sites across years. R (...
kathy's user avatar
  • 131
9 votes
4 answers
6k views

Multi-way nonparametric anova

I have to analyze a factorial design with five factors (one of them nested in another one) and numeric responses. I would like to perform a nonparametric ANOVA, but of course I can't use neither ...
user avatar
9 votes
3 answers
10k views

How can I obtain some of all possible combinations in R?

Sometimes I want to do an exact test by examining all possible combinations of the data to build an empirical distribution against which I can test my observed differences between means. To find the ...
russellpierce's user avatar
19 votes
3 answers
18k views

A non-parametric repeated-measures multi-way Anova in R?

The following question is one of those holy grails for me for some time now, I hope someone might be able to offer a good advice. I wish to perform a non-parametric repeated measures multiway anova ...
Tal Galili's user avatar
  • 21.8k

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