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0 votes
0 answers
39 views

Likelihood ratios not distributed as a chi2 distribution with the correct dof (Wilks' theorem)

I perform Bayesian inference on a mixture model such that $\mu$ is the mixture weight for a feature in the mixture $p(x | \mu, \theta) = \mu p_{f}(x|\theta) + (1-\mu)p_{nf}(x|\theta)$ I have prior $p(\...
malavika v vasist's user avatar
0 votes
0 answers
33 views

How to perform likelihood ratio test for bayesian neural network?

I am building a Bayesian neural network with Poisson likelihood and 50 features for time series prediction. Parameters of the model are learned using variational inference. I am trying to see whether ...
newbie's user avatar
  • 225
3 votes
3 answers
158 views

Why can a likelihood ratio not give evidence for the null since it is a model comparison?

I am curious as to why a likelihood ratio cannot give positive evidence for the null, since it is a model comparison. Indeed, this is more confusing given the fact that Bayes Factors are similar ...
HereItIs's user avatar
  • 121
0 votes
0 answers
52 views

Asymptotical convergence of the Likelihood ratio test in general hypotheses testing

I'm aware that the 2-loglikelihood ratio is asymptotically distributed as a Chi-squared distribution under the Null hypotheses for nested hypotheses. My question is, there is any generalized formula ...
Dr Richard Clare's user avatar
1 vote
1 answer
890 views

Comparison between Nested and Non-nested Model: BIC and LRT

I would like to select the best model for predicting breast cancer risk, specifically, it is the comparisons between weight/BMI/height, as other covariates remain the same in all the models. But I got ...
Zhoufeng's user avatar
  • 143
6 votes
1 answer
92 views

Does ( P(B|A) - P(B|~A) ) / P(B|A) have a name?

Without going into the details, which are unnecessary here, this morning I found uses for the quantity $$ S = \dfrac{P(B|A) - P(B|\overline A)}{P(B|A)} , $$ something like the amount of "...
dwn's user avatar
  • 163
1 vote
1 answer
117 views

Manually calculating `false negative risk` (using Likelihood ratio and Bayesian analysis)

The question is with reference to this paper: https://arxiv.org/pdf/1802.04888.pdf and https://royalsocietypublishing.org/doi/full/10.1098/rsos.171085 It give clearly how to calculate ...
rnso's user avatar
  • 10.1k
1 vote
1 answer
59 views

Manually calculating `false positive risk` (using Likelihood ratio and Bayes analysis)

The question is with reference to this paper: https://arxiv.org/pdf/1802.04888.pdf In the real life example on page 17-18, it is advised that the ...
rnso's user avatar
  • 10.1k
1 vote
0 answers
244 views

Bayes Factor, Likelihood Ratio, and p-values

I am interested in "simple" changepoint detection algorithms. I originally was using very simples approaches that consist of making t-test calculations and calculate a p-value (similar to what is ...
2WFR's user avatar
  • 49
0 votes
0 answers
167 views

How to calculate Bayes factor for conditional probability?

I have a data set of 1000 drug-effect pairs. I am trying to identify which drug is most likely given the observed effect. My original approach was to calculate $P\left(d_j | e_i\right)$ for each ...
mac389's user avatar
  • 181
2 votes
0 answers
365 views

Can the r-scale value (for Bayes Factor) be directly based on Cohen's d?

I want to set an r-scale value for a Bayesian t-test (i.e. to calculate Bayes Factor likelihood ratio) based on previous results (i.e., from a posterior). But I simply cannot find a straightforward ...
gaspar's user avatar
  • 234
4 votes
1 answer
121 views

Philosophy behind "hypothesis" in Bayes factor

The posterior odds is the ratio of the Bayes factor $\times$ prior odds of the hypotheses. $\frac{p(H_0 | D)}{p(H_1 | D)}$ = $\frac{p(D | H_0)}{p(D | H_1)} \frac{p(H_0)}{p(H_1)}$ It is considered a ...
ken's user avatar
  • 423
3 votes
0 answers
67 views

Bayesian Decision Making (for particular problem)

I've read several papers why p-values should be replaced by Bayes factors and trying to use them. What I have: say, I have matrix of 2000 rows and 1000 columns. In each column I need to make a ...
German Demidov's user avatar
1 vote
1 answer
145 views

Does weighting the Likelihood Ratios by a prior give the Likelihood ratios any Bayesian property?

I have a question regarding Bayesian Hypothesis testing using "Bayes Factors". Does weighting the Likelihood Ratios by a prior give the Likelihood ratios any property (e.g., removing conditionality ...
rnorouzian's user avatar
  • 4,076
4 votes
1 answer
2k views

How to compare two models of binomial distributions?

Assume we have two series of indepedent success-failure observations, e.g. coin tosses $$ \boldsymbol x_1 \in \{H,T\}^{n_1} \\ \boldsymbol x_2 \in \{H,T\}^{n_2} $$ Also, let $k_i$ be the number of ...
Simon's user avatar
  • 143

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