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    ...unless the reviewers also anonymize themselves via proxies and whatnot.
    – JeffE
    Commented May 8, 2012 at 13:44
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    @JeffE I agree with you, the reviewers can protect their anonymity themselves, I'm not sure though how many could technically do it :) (I know several researchers who would have no idea of how to set up a proxy!).
    – user102
    Commented May 8, 2012 at 15:04
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    For 300 lines, you could just include the code on one page of your appendix, and let the reviewers copy and paste from their pdf viewer.
    – JeffE
    Commented May 8, 2012 at 15:08
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    @JeffE: The problem is reviewers who don't even realize their anonymity is threatened. It's rare for this to occur, but it has happened. I know of one case involving a journal submission. One referee report complained that the simulation results weren't convincing, so the authors offered additional data for the referee on their web site, and then identified him based on the logs and complained to the editor about why they believed he was biased. The most shocking thing was that the authors told the editor what they had done. I'd guess that it happens much more often secretly. Commented May 8, 2012 at 15:45
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    @AnonymousMathematician: This is clearly something that needs to be managed by the conference organizers, then. If they want to insist on total anonymity, then they need to provide the resources to make that happen. Perhaps the code is provided to them, and they host it on a website. Or they create the repository, so that the file provider doesn't know the URL.
    – aeismail
    Commented May 8, 2012 at 17:30