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    No, GIMP wont work, I have thousands of images I need to convert. And when I use GIMP on DICOM files, it opens them like the .pnm conversion sample I posted in the question, where the images are strangely inverted.
    – Stéphane
    Commented Oct 30, 2019 at 10:33
  • I opened your example in gimp and I think it is working prntscr.com/pq2s30 I also think GIMP can be used for batch convert but I am not 100% on this.
    – Rok
    Commented Oct 30, 2019 at 10:42
  • No, that image is not correct. See the top of my question. It should look like that first image, while in gimp it looks like the 2nd image.
    – Stéphane
    Commented Oct 30, 2019 at 10:50